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Planttfcat

WebHowever, it should be taken into account that PlantTFcat was used to perform TF enrichment annotation as it covers more TF families and contains other regulatory factors … WebDec 8, 2024 · PlantTFDB 4.0: toward a central hub for transcription factors and regulatory interactions in plants. Nucleic Acids Research, 45 (D1):D1040-D1045. Jin JP, He K, Tang …

The TF families of the three Gossypium species based on PlantTFcat …

WebPlantTFcat is a high-performance web-based plant transcription factor and transcriptional regulator categorization and analysis tool, designed to identify and categorize TFs and … WebNov 12, 2013 · Here, we present PlantTFcat, a high-performance web-based analysis tool that is designed to identify and categorize plant TF/TR/CR genes from genome-scale … how to save on grocery bill https://horseghost.com

PlantTFcat – My Biosoftware – Bioinformatics Softwares Blog

http://planttfdb.gao-lab.org/ WebWe used BLAT (a BLAST-like alignment tool) to determine the positions of candidate sequences on the wheat genome. BLAT is a sequence alignment tool similar to BLAST but it is structured differ- ently. It quickly finds similarities in DNA and proteins but requires an exact or nearly exact match to find a hit [17]. Web95 The identifications of transcription factors (TF) were analyzed by PlantTFcat online tool 96 (http://plantgrn.noble.org/PlantTFcat) [14]. SSRs (Simple Sequence Repeats), one of molecular markers, it 97 is a potent tool for genetic study and marker assisted selection (MAS) in many crops [15,16]. how to save on gimp

(PDF) PlantTFcat: an online plant transcription factor and ...

Category:Transcriptional Regulator – My Biosoftware – Bioinformatics …

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Planttfcat

PlantTFcat: an online plant transcription factor and ... - Paperity

WebOct 4, 2016 · PlantTFcat: an online plant transcription factor and transcriptional regulator categorization and analysis tool. BMC Bioinformatics. 2013; 14: 321 View in Article Scopus (98) PubMed Crossref Google Scholar Gapper N.E. Giovannoni J.J. Watkins C.B. Understanding development and ripening of fruit crops in an ‘omics’ era. Hortic. Res. 2014; … WebFile Date Size [1.9] Structural (gff3, gtf) and Functional Annotation (Interpro/Blast2GO/iTAK/PlantTFCat/E2P2) Tue Oct 25 08:32:56 2024: 1373M [1.9] Mt_gene_Acronyms ...

Planttfcat

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WebPlantTFcat: An online plant transcription factor and transcriptional regulator categorization and analysis tool. Dai X. Sinharoy S. Udvardi M. Zhao P.X. BMC Bioinformatics, 2013. … WebDownload Table Benchmark evaluation of PlantTFcat using the PlnTFDB reference database from publication: PlantTFcat: An online plant transcription factor and transcriptional regulator ...

WebNov 12, 2013 · Results: Here, we present PlantTFcat, a high-performance web-based analysis tool that is designed to identify and categorize plant TF/TR/CR genes from … PlantTFcat: An Online Plant Transcription Factor and Transcriptional Regulator Categorization and Analysis Tool. Upload PROTEIN sequence (s) or NT sequence (s) in FASTA format: [Load demo data] - file / input sequence size limit: 200M. - invalid sequences will be ignored during analysis.

WebJun 8, 2024 · PlantTFcatis a high-performance web-based plant transcription factor and transcriptional regulator categorization and analysis tool, designed to identify and categorize TFs and TRs in genome-scale protein or nucleic acid sequences. ::DEVELOPER The Zhao Bioinformatics Laboratory :: REQUIREMENTS Web browser :: DOWNLOAD NO :: MORE … WebRESULTS. Here, we present PlantTFcat, a high-performance web-based analysis tool that is designed to identify and categorize plant TF/TR/CR genes from genome-scale protein and …

WebPlantTFcat is made up of an intuitive web interface that lets users to submit huge numbers of sequences and get analysis results, as well as a complex backend high-performance …

WebNov 12, 2013 · Here, we present PlantTFcat, a high-performance web-based analysis tool that is designed to identify and categorize plant TF/TR/CR genes from genome-scale … north face red body warmerWebJul 24, 2024 · The data include the transcriptome of Peganum harmala species, its annotation and sequences of genes involved in stress response and alkaloid biosynthesis. These supporting data belong to an article published by Jazayeri et al. 2024 in BioTechnologia journal. They are 6 files including Supplementary File 1 containing … how to save on gym membershipsWebPlantTFcat: an online plant transcription factor and transcriptional regulator categorization and analysis tool. BMC Bioinformatics 14, 321. * Equally contributed. Sinharoy S, Torres-Jerez I, Bandyopadhyay K, Kereszt A, Pislariu CI, Nakashima J, Benedito VA, Kondorosi E and Udvardi MK (2013). how to save on inspect elementhttp://planttfdb.gao-lab.org/ north face red fleeceWebPlantTFcat: an online plant transcription factor and transcriptional regulator categorization and analysis tool. Xinbin Dai+, Senjuti Sinharoy+, Michael Udvardi and Patrick Xuechun Zhao* north face recon on salenorth face recon for day hikingWebSep 27, 2014 · Compared to PlantTFcat, our annotation has better coverage and higher accuracy in identifying and classifying Yugu1 TFs. In summary, our recovery rate was … north face recon philippines