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Actinidia chinensis genome database

WebAug 1, 2024 · The database currently contains all publicly available genome and gene sequences, gene annotations, biochemical pathways, transcriptome profiles derived from public RNA-Seq datasets, and... WebOct 15, 2024 · Two versions of the A. chinensis genomes have been previously assembled, based mainly on relatively short reads. Here, we report an improved chromosome-level …

Chromosome-scale genome assembly of a natural diploid kiwifruit ...

WebActinidia chinensis var. chinensis (2n = 2x = 58) is a fruit tree in the same genus of kiwifruit. It is native to China. This genome corresponds to individual Red5, a diploid F3 … WebFeb 14, 2024 · The most commercialized kiwifruit, Actinidia chinensis var. deliciosa (Acd), is an allohexaploid (2n = 6x = 174), making high-quality assemblage genome challenging. We previously discovered a... health ny insurance https://horseghost.com

high-quality Actinidia chinensis (kiwifruit) genome Horticulture ...

WebJun 6, 2024 · DNA sequencing data of the kiwifruit genome provide us valuable information of gene family in Actinidia chinensis to further understand gene function and regulation mechanism. In this study, 13 members of the APX protein family were found in Actinidia chinensis , more than Arabidopsis thaliana and Oryza sativa , and less than Gossypium … WebActinidia chinensis var. chinensis (2n = 2x = 58) is a fruit tree in the same genus of kiwifruit. It is native to China. This genome corresponds to individual Red5, a diploid F3 sibcross with a predicted inbreeding coefficient of 37.5%, submitted by the New Zealand Institute for Plant and Food Research Ltd. Taxonomy ID 1590841 WebApr 16, 2024 · Results. A second genome of an A. chinensis (genotype Red5) was fully sequenced. This new sequence resulted in a 554.0 Mb assembly with all but 6 Mb assigned to pseudo-chromosomes. Pseudo-chromosomal comparisons showed a considerable number of translocation events have occurred following a whole genome duplication … good company seafood restaurant houston

Identification and expression profiling analysis of ascorbate ...

Category:Actinidia_chinensis - Ensembl Genomes 56

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Actinidia chinensis genome database

The comparative studies of complete chloroplast genomes in Actinidia ...

http://kiwifruitgenome.org/feature/gene/Ach00g381791.2 WebASM966300v1 Organism: Actinidia chinensis (eudicots) Submitter: Sichuan University Date: 2024/11/14 Assembly type: Assembly level: Chromosome Genome representation: …

Actinidia chinensis genome database

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WebActinidia / ˌ æ k t ɪ ˈ n ɪ d i ə / is a genus of woody and, with a few exceptions, dioecious plants native to temperate eastern Asia, occurring throughout most of China, Taiwan, Korea, and Japan, and extending … WebOct 15, 2024 · Actinidia chinensis (kiwifruit) is a perennial horticultural crop species of the Actinidiaceae family with high nutritional and economic value. Two versions of the A. chinensis genomes have been previously assembled, based mainly on …

WebActinidia chinensis (Red5) Actinidia eriantha (White) RNA-Seq; Browser . Actinidia chinensis (Hong Yang v2) Actinidia chinensis (Hong Yang v3) Actinidia chinensis (Red5) Actinidia … WebMar 6, 2024 · We assembled and annotated genome sequences of three kiwifruit species (genus Actinidia) and uncovered recurrent sex chromosome turnovers in multiple lineages. Specifically, we observed...

WebFeb 17, 2024 · The genus Actinidia, commonly known as kiwifruit, ‘the king of fruits’, includes economically important horticultural species, such as A.chinensis and A.chinensis var. deliciosa that have been extensively cultivated worldwide (Testolin et al. 2016).The genus Actinidia, together with other two sister genera, Clematoclethra and Saurauia, … WebFeb 17, 2024 · Actinidia eriantha is a characteristic fruit tree featuring with great potential for its abundant vitamin C and strong disease resistance. It has been used in a wide range of breeding programs and functional genomics studies. Previously published genome assemblies of A. eriantha are quite fragmented and not highly contiguous.

WebBlastP simply compares a protein query to a protein database. PSI-BLAST allows the user to build a PSSM (position-specific scoring matrix) using the results of the first BlastP run. PHI-BLAST performs the search but limits alignments to …

WebThe most commercialized kiwifruit, Actinidia chinensisvar. deliciosa(Acd), is an allohexaploid (2n = 6x = 174), making high-quality assemblage genome challenging. We previously discovered a rare naturally occurring diploid Acdplant. health nytimesWebKiwifruit Genome Database Toggle navigation. Home; Genome . Actinidia chinensis (Hong Yang v2) Actinidia chinensis (Hong Yang v3) Actinidia chinensis (Red5) ... A0A2R6RSP6_ACTCH (E3 ubiquitin-protein ligase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc03295 PE=3 SV=1) HSP 1 Score: 653.3 bits (1684), … health ny state health ny govWebNational Center for Biotechnology Information health nz addresshealth nz ceWebOct 15, 2024 · Actinidia chinensis (kiwifruit) is a perennial horticultural crop species of the Actinidiaceae family with high nutritional and economic value. Two versions of the A. chinensis genomes have... health nz govtWebGVF (Genome Variation Format) is a simple tab-delimited format derived from GFF3 for variation positions across the genome. There are GVF files for different types of variation data (e.g. somatic variants, structural variants etc). For more information see the "README" files in the GVF directory. VCF (variation data) good company stocks to invest inWebActinidia chinensis (Chinese gooseberry, kiwifruit or yang tao) is native to China. Seeds were brought to New Zealand in 1904 [1] and have since been developed into the … health nz hui